Reduce and Visualize Gene Ontology

Web service that summarizes long and unintelligible lists of gene ontology.

REVIGO is a Web server that summarizes long, unintelligible lists of Gene Ontology (GO) terms by finding a representative subset of the terms using a simple clustering algorithm that relies on semantic similarity measures. Furthermore, REVIGO visualizes this non-redundant GO term set in multiple ways to assist in interpretation: multidimensional scaling and graph-based visualizations accurately render the subdivisions and the semantic relationships in the data, while treemaps and tag clouds are also offered as alternative views.

Resource organization
Resource providers
ON-BOARDED 
ON-BOARDED 
 THEMATIC
ON-BOARDED 

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Website

http://revigo.irb.hr

Readiness

TRL9

Domain

Natural Sciences Medical & Health Sciences

Subdomain

Biological Sciences Medical Biotechnology

Category

Data Analysis

Subcategory

Image/Data Analysis Visualization

Target users

Research Groups Students Researchers Research Organisations

Access type

Virtual

Access mode

Free

Tags

Gene ontology data analytics visualization

Contact

Fran Supek, Group Leader
email: fran.supek@irb.hr
phone: 0034934039942

Helpdesk e-mail

revigo@irb.hr

Security contact e-mail

fran.supek@irbbarcelona.org

The NI4OS-Europe project is funded by the European Commission under the Horizon 2020 European research infrastructures grant agreement no. 857645.