Atlas of prokaryotic traits

Atlas of prokaryotic traits


CRITICAL

The ProTraits a web-based atlas of prokaryotic traits describes environmental preferences of microbes, interactions with other organisms (including pathogenicity), biochemical phenotypes, resistance to chemicals and other stressors, and utility in industrial applications. ProTraits recognizes 424 phenotypic traits and covers 3,046 bacterial or archeal species. Overall, it provides 545,081 annotations (less than 10% FDR, tallying both the positive and the negative labels), of which 503,308 are novel.

Resource organization

Resource providers

ON-BOARDED 
...
Ruđer Bošković Institute

Bijenička street 54, 10000 Zagreb, Croatia (HR)

ON-BOARDED 
...
Ruđer Bošković Institute

Bijenička street 54, 10000 Zagreb, Croatia (HR)

 THEMATIC
CANDIDATE 

...

Website

http://protraits.irb.hr/

Readiness

TRL8

Domain

Natural Sciences Medical & Health Sciences

Subdomain

Biological Sciences Medical Biotechnology

Category

Data Analysis

Subcategory

Discovery Machine Learning Visualization

Target users

Research Groups Students Research Projects Researchers Research Organisations

Access type

Virtual

Access mode

Free

Tags

Visualization data retrieval prokaryotic traits

Contact

Tomislav Šmuc, Research advisor, Head of Laboratory
email: smuc@irb.hr
phone: +38514561085

Helpdesk e-mail

protraits@irb.hr

Security contact e-mail

rajko.horvat@irb.hr

The NI4OS-Europe project is funded by the European Commission under the Horizon 2020 European research infrastructures grant agreement no. 857645.